Installation

These tutorials run on Python 3.12–3.14. The steps below get you a fresh environment with everything needed to run the notebooks locally.

First, clone the repository:

git clone https://github.com/BalzaniEdoardo/nemos_glm_tutorials.git
cd nemos_glm_tutorials

Then pick your package manager:

uv

uv creates and manages the virtual environment for you — one command installs the project with the notebooks extra into a fresh .venv:

uv sync --extra notebooks

Launch JupyterLab inside that environment:

uv run jupyter lab

conda

Create and activate a fresh environment, then install with the notebooks extra:

conda create -n nemos-tutorials python=3.12
conda activate nemos-tutorials

pip install -e ".[notebooks]"

Launch JupyterLab:

jupyter lab

Running a tutorial

The tutorial notebooks live on this website. To run one locally:

1. Open the tutorial page you want (browse the collections from the home page).

2. At the top of the page, in the “Run this tutorial yourself” box, click the Jupyter notebook (.ipynb) download link to save the .ipynb.

3. Launch JupyterLab in the environment you created above and open the downloaded notebook:

   # uv
   uv run jupyter lab
   
   # conda (with the env activated)
   jupyter lab
   

Every notebook downloads clean (no stored outputs), so running it top to bottom reproduces the figures from scratch.